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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39339647_39340615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39339647 - 39340615

Intron Length:

969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGGTT

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

AGAAATTTACAT

Flanking Amino Acid:

VMTMPYAHCKGILYGTMTLE

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

69.9

40.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

92.6

0.96

0.6

88.3

21.3

Minor 5ss

34.2

-1.8

3.9

55.6

48.6

Minor BPS

43.3

-0.4

1.8

55.37

39.8

Associated Gene:

Gene:

OSBPL8

Ensembl Gene ID:

ENSAPLG00000016005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036995

39333189 - 39390020

56832

ENSAPLT00000025836

39333189 - 39390020

56832

ENSAPLT00000016708

39333189 - 39365962

32774