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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3940535_3947368_F

Intron Information:

Intron Rank:

150876

Intron Class:

major

Intron Phase:

Intron Coordinates:

3940535 - 3947368

Intron Length:

6834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTACTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTACTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.6

35.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.3

0.68

0.9

75.5

38.5

Minor 5ss

30.2

-2.3

3.3

39.6

46.4

Minor BPS

59.5

0.29

1.8

75.76

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036123

3940152 - 3967612

27461