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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3940535_3954499_F

Intron Information:

Intron Rank:

150857

Intron Class:

major

Intron Phase:

Intron Coordinates:

3940535 - 3954499

Intron Length:

13965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATGTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAACCAT

U12 Branch Point Sequence:

TTTTCCCCACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.6

35.7

Major BPS

49.6

-0

1.3

58.8

37.4

Major PPT

72.9

0.52

0.8

69.8

29.8

Minor 5ss

30.2

-2.3

3.3

39.6

46.4

Minor BPS

52.1

0.14

2.1

81.02

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019574

3940152 - 3958921

18770