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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3942589_3947368_F

Intron Information:

Intron Rank:

150871

Intron Class:

major

Intron Phase:

Intron Coordinates:

3942589 - 3947368

Intron Length:

4780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTACTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTACTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.3

0.68

0.9

75.5

38.5

Minor 5ss

41.6

-0.9

3.2

56.7

47.6

Minor BPS

59.5

0.29

1.8

75.76

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034696

3942497 - 3967612

25116