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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3947493_3950898_F

Intron Information:

Intron Rank:

150872

Intron Class:

major

Intron Phase:

Intron Coordinates:

3947493 - 3950898

Intron Length:

3406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.6

0.82

0.8

81.1

30.9

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

68.9

0.59

1.6

81.74

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034696

3942497 - 3967612

25116