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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39547784_39553229_R

Intron Information:

Intron Rank:

152507

Intron Class:

major

Intron Phase:

Intron Coordinates:

39547784 - 39553229

Intron Length:

5446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTTTCCTGAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.9

38.6

Major BPS

65.7

0.39

71.3

30.3

Major PPT

84.8

0.78

0.7

76.7

Minor 5ss

30.5

-2.2

2.5

33.4

41.8

Minor BPS

75.6

0.78

1.5

85.18

32.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021745

39547011 - 39554009

6999