Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_39637951_39656326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39637951 - 39656326

Intron Length:

18376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCGGGCCG

5'SS Class:

major

3'SS Sequence:

TTGTCTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTCTAATAACA

Flanking Amino Acid:

AGCVPILHPEEIKPQSHYNH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.4

50.5

40.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.9

0.74

0.7

81.7

30.3

Minor 5ss

25.1

-2.9

3.2

30.7

42.7

Minor BPS

50.1

-0

1.9

68.01

37.3

Associated Gene:

Gene:

ZDHHC17

Ensembl Gene ID:

ENSAPLG00000014034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014683

39637888 - 39707855

69968