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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3967620_3969135_F

Intron Information:

Intron Rank:

150863

Intron Class:

major

Intron Phase:

Intron Coordinates:

3967620 - 3969135

Intron Length:

1516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

ATATTTGCATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

77.3

33.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

89.8

0.89

0.7

Minor 5ss

37.4

-1.4

3.5

52.2

Minor BPS

40.4

-0.6

2.1

58.39

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026336

3940152 - 3969207

29056

ENSAPLT00000021706

3951072 - 3969207

18136