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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39716121_39716834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39716121 - 39716834

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

GTGTGTTTAAGC

Flanking Amino Acid:

AAEKVIGAGKPWHKNCFRCA

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

80.1

0.68

0.7

73.6

31.4

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

49.9

-0

2.1

62.28

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037413

39716027 - 39723741

7715

ENSAPLT00000014963

39715651 - 39719623

3973