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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39716968_39717858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39716968 - 39717858

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTATCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTTTACTAAGAA

Flanking Amino Acid:

RGERLGIKPESTPSPHRPTT

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

74.2

0.6

39.4

Major PPT

81.4

0.71

0.8

81.4

29.1

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

48.7

-0.1

2.1

69.86

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014963

39715651 - 39719623

3973