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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39718028_39719334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39718028 - 39719334

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTTCCCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TGTCCCTTAAGG

Flanking Amino Acid:

RSFHRCCFLCMVCRKNLDST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

85.6

0.8

0.6

78.7

30.2

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

66.3

0.37

1.8

69.9

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014963

39715651 - 39719623

3973