Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_39791424_39792457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39791424 - 39792457

Intron Length:

1034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTGG

5'SS Class:

major

3'SS Sequence:

CCTTTCCTGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

GTGACTGTAATA

Flanking Amino Acid:

QDTVDHSKFKTKVRRLYDIA

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

63.4

43.8

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

0.52

0.9

73.4

31.6

Minor 5ss

-0.5

2.8

55.9

42.9

Minor BPS

48.7

-0.1

60.25

40.4

Associated Gene:

Gene:

E2F7

Ensembl Gene ID:

ENSAPLG00000014506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015116

39784454 - 39798224

13771