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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39823318_39832861_F

Intron Information:

Intron Rank:

137975

Intron Class:

major

Intron Phase:

Intron Coordinates:

39823318 - 39832861

Intron Length:

9544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TCACTCTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

76.2

33.4

Major BPS

77.8

0.69

78.2

31.8

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

45.4

-0.5

2.8

65.7

39.3

Minor BPS

62.6

0.39

1.4

66.75

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030606

39815046 - 39833085

18040