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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40031837_40054259_F

Intron Information:

Intron Rank:

124342

Intron Class:

major

Intron Phase:

Intron Coordinates:

40031837 - 40054259

Intron Length:

22423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

64.3

0.32

1.1

60.4

40.4

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

54.4

0.13

75.35

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048477

40031495 - 40054997

23503