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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40288236_40301861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40288236 - 40301861

Intron Length:

13626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCATACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AATCCTTTAATT

Flanking Amino Acid:

QSKTHQDMQSSLTARYATQS

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

80.2

30.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.72

0.8

76.9

30.8

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

73.5

0.82

1.1

81.18

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030444

40256579 - 40446672

190094

ENSAPLT00000024052

40175386 - 40446672

271287

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000039035

40256579 - 40446672

190094