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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40304756_40311117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40304756 - 40311117

Intron Length:

6362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTCTTTCTATTT

Flanking Amino Acid:

PPQYANGNEKADSPKGPHPS

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

20.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.2

0.63

82.8

32.3

Minor 5ss

34.4

-1.8

3.3

48.7

47.5

Minor BPS

49.1

0.02

1.9

71.32

40.7

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000030444

40256579 - 40446672

190094

ENSAPLT00000024052

40175386 - 40446672

271287