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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40340681_40377719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40340681 - 40377719

Intron Length:

37039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGTG

5'SS Class:

major

3'SS Sequence:

TCTTTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTAAA

U12 Branch Point Sequence:

AGTACGTAAAGT

Flanking Amino Acid:

GVHDVTVDADSWDDSSSVSS

Intron Amino Acid Position:

881

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

67.8

43.5

Major BPS

53.8

0.1

1.2

55.6

37.8

Major PPT

89.4

0.89

0.6

84.8

22.8

Minor 5ss

38.4

-1.3

3.7

49.2

Minor BPS

-0.4

2.5

63.63

46.3

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024052

40175386 - 40446672

271287

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000030444

40256579 - 40446672

190094