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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40382130_40384225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40382130 - 40384225

Intron Length:

2096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGAAAC

5'SS Class:

major

3'SS Sequence:

TACTTTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATACTTTTATT

Flanking Amino Acid:

KAGTSALKTPGKTDDAKASE

Intron Amino Acid Position:

1020

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

40.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.2

0.63

0.9

77.9

35.3

Minor 5ss

31.9

-2.1

3.2

34.6

41.6

Minor BPS

61.3

0.44

1.6

77.57

39.2

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000030444

40256579 - 40446672

190094

ENSAPLT00000024052

40175386 - 40446672

271287

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000039035

40256579 - 40446672

190094