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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40384932_40394785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40384932 - 40394785

Intron Length:

9854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTGTTTTGAGCA

Flanking Amino Acid:

YPDIASPTFRRYTPSSRQTS

Intron Amino Acid Position:

1255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

80.5

0.69

0.9

76.9

42.1

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

53.8

0.11

1.7

67.45

39.4

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015318

40175386 - 40446672

271287