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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40416601_40418332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40416601 - 40418332

Intron Length:

1732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TATATTTCAAGC

Flanking Amino Acid:

QSLTMTAEQKESELIELRET

Intron Amino Acid Position:

1452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

84.3

29.6

Major BPS

0.79

0.8

83.7

25.7

Major PPT

78.7

0.65

0.8

72.8

32.1

Minor 5ss

42.7

-0.8

58.2

46.4

Minor BPS

-0.1

1.8

59.92

39.3

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000030444

40256579 - 40446672

190094

ENSAPLT00000024052

40175386 - 40446672

271287