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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40419867_40421674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40419867 - 40421674

Intron Length:

1808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TCTTGCTCTATG

Flanking Amino Acid:

DSKKKKKKNWLRSSFKQAFG

Intron Amino Acid Position:

1530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

68.1

0.45

58.1

38.5

Major PPT

85.4

0.8

0.9

76.9

42.1

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

-0.5

2.3

55.22

46.2

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000030444

40256579 - 40446672

190094