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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40425767_40428877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40425767 - 40428877

Intron Length:

3111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGAATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTATGTTGATT

Flanking Amino Acid:

QIREAMNRMQNEIEILKAEN

Intron Amino Acid Position:

1639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

69.3

0.44

62.1

42.5

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

54.3

0.22

2.1

78.91

37.7

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000030444

40256579 - 40446672

190094

ENSAPLT00000024052

40175386 - 40446672

271287