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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40433404_40433736_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40433404 - 40433736

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

AATATAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TATACTTTAATA

Flanking Amino Acid:

LDGVIRRLFKEYIFRVDPAT

Intron Amino Acid Position:

1762

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

85.7

0.89

0.8

22.2

Major PPT

69.8

0.45

64.4

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

74.2

0.76

1.2

77.27

33.3

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024052

40175386 - 40446672

271287

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000030444

40256579 - 40446672

190094