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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40433906_40434633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40433906 - 40434633

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACCC

5'SS Class:

major

3'SS Sequence:

TCTTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGACAA

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

DNNIITVNLKGVEENSLDSF

Intron Amino Acid Position:

1818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

65.8

38.4

Major BPS

46.8

-0.2

50.7

34.3

Major PPT

87.5

0.84

0.8

80.2

37.3

Minor 5ss

32.6

-2

3.1

43.3

43.8

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024052

40175386 - 40446672

271287

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000030444

40256579 - 40446672

190094