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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40438046_40438448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40438046 - 40438448

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATTCA

5'SS Class:

major

3'SS Sequence:

CATTTCTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TGCTACTTGACA

Flanking Amino Acid:

SPNLELHHNFRWVLCANHTE

Intron Amino Acid Position:

1972

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.2

35.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

74.3

0.55

0.9

35.8

Minor 5ss

38.8

-1.3

3.1

50.7

45.6

Minor BPS

66.2

0.5

1.5

72.43

39.2

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024052

40175386 - 40446672

271287

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000019516

40256579 - 40446672

190094

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000030444

40256579 - 40446672

190094