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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40439314_40441996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40439314 - 40441996

Intron Length:

2683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ATCCATACTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TTATCCATACTA

Flanking Amino Acid:

LLEAVREGLQMYGKRAPWED

Intron Amino Acid Position:

2078

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

79.7

35.4

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

70.3

0.46

0.9

62.4

37.7

Minor 5ss

-0.9

2.9

58.1

46.5

Minor BPS

0.25

1.9

73.22

38.7

Associated Gene:

Gene:

NAV3

Ensembl Gene ID:

ENSAPLG00000014672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030444

40256579 - 40446672

190094

ENSAPLT00000015318

40175386 - 40446672

271287

ENSAPLT00000024052

40175386 - 40446672

271287

ENSAPLT00000020353

40175386 - 40446672

271287

ENSAPLT00000046946

40175386 - 40446672

271287

ENSAPLT00000039035

40256579 - 40446672

190094

ENSAPLT00000019516

40256579 - 40446672

190094