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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40440243_40445040_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40440243 - 40445040

Intron Length:

4798

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCAACTCTG

5'SS Class:

weak_major

3'SS Sequence:

ATGAACAATGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTTAC

U12 Branch Point Sequence:

TTTAGTTTACCC

Flanking Amino Acid:

FSLFPFLSCSSSNSLLTSVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.5

58.4

45.9

Major BPS

62.6

0.31

1.1

55.1

41.7

Major PPT

57.7

0.17

1.1

49.1

43.1

Minor 5ss

-1.7

4.1

50.6

45.8

Minor BPS

52.2

0.05

2.1

70.49

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034778

40440192 - 40445148

4957