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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40756497_40858134_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40756497 - 40858134

Intron Length:

101638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TTTTTCCCAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTTCCCAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.1

31.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

82.3

0.73

0.8

78.5

28.8

Minor 5ss

33.9

-1.8

3.2

41.6

40.4

Minor BPS

62.5

0.39

1.9

80.29

35.2

Associated Gene:

Gene:

SYT1

Ensembl Gene ID:

ENSAPLG00000014912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021715

40713743 - 40984849

271107

ENSAPLT00000015570

40714533 - 40985681

271149