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Intron Name: Anas_platyrhynchos_platyrhynchos_1_40858327_40893500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40858327 - 40893500

Intron Length:

35174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAC

U12 Branch Point Sequence:

TTTTCTTTTCCA

Flanking Amino Acid:

KFMNELNKIPLPPWALIAIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

62.6

0.31

1.1

55.1

41.7

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

-0.2

3.6

78.96

37.6

Associated Gene:

Gene:

SYT1

Ensembl Gene ID:

ENSAPLG00000014912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047319

40807217 - 40985681

178465

ENSAPLT00000021715

40713743 - 40984849

271107

ENSAPLT00000015570

40714533 - 40985681

271149