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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41018865_41023024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41018865 - 41023024

Intron Length:

4160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGCACG

5'SS Class:

major

3'SS Sequence:

TCTCCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TCTCCTTTCACA

Flanking Amino Acid:

LKEEIDLLNRDLDDIEDENE

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

44.9

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

83.8

0.76

0.7

78.9

26.6

Minor 5ss

-1

2.8

46.8

42.3

Minor BPS

0.37

1.8

72.26

40.2

Associated Gene:

Gene:

PAWR

Ensembl Gene ID:

ENSAPLG00000027740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047270

41012056 - 41094892

82837