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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41023130_41024482_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41023130 - 41024482

Intron Length:

1353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTACATTTGACA

Flanking Amino Acid:

LEKRIEELERELAKERQENL

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.5

33.9

Major BPS

73.9

0.59

30.2

Major PPT

79.8

0.67

0.8

77.6

36.1

Minor 5ss

32.5

-2

2.7

35.6

40.5

Minor BPS

59.3

0.28

1.5

69.77

35.8

Associated Gene:

Gene:

PAWR

Ensembl Gene ID:

ENSAPLG00000027740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047270

41012056 - 41094892

82837