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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41024631_41033400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41024631 - 41033400

Intron Length:

8770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TATGCCTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TTTGTTCTATGC

Flanking Amino Acid:

SSRMVSSRYKSTANAPEDDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

76.8

31.7

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

0.58

0.9

70.1

Minor 5ss

38.2

-1.3

3.4

55.2

Minor BPS

42.5

-0.5

2.1

57.6

41.9

Associated Gene:

Gene:

PAWR

Ensembl Gene ID:

ENSAPLG00000027740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047270

41012056 - 41094892

82837