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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41033436_41057653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41033436 - 41057653

Intron Length:

24218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AAAATATTAATA

Flanking Amino Acid:

ADTTGSYLLQDSSRMVSSRY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

86.6

0.82

0.8

84.6

30.3

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

50.2

1.6

57.86

34.7

Associated Gene:

Gene:

PAWR

Ensembl Gene ID:

ENSAPLG00000027740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047270

41012056 - 41094892

82837