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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41139116_41143557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41139116 - 41143557

Intron Length:

4442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCCA

5'SS Class:

major

3'SS Sequence:

ATTAACCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATTAACC

Flanking Amino Acid:

TGSTSAGVPSRSYLTPVRDE

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

65.1

40.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

68.7

0.42

0.9

64.2

38.1

Minor 5ss

31.1

-2.2

3.2

40.1

45.4

Minor BPS

64.9

0.45

1.8

76.9

38.7

Associated Gene:

Gene:

PPP1R12A

Ensembl Gene ID:

ENSAPLG00000015197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035807

41112823 - 41236452

123630