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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41143720_41145575_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41143720 - 41145575

Intron Length:

1856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGGAT

5'SS Class:

major

3'SS Sequence:

GTCTCTCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TTCACTGTAAAT

Flanking Amino Acid:

PTSLNTSYQRSGSFGRRQDD

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

0.9

70.8

34.6

Major BPS

82.3

0.8

83.6

25.8

Major PPT

80.6

0.69

0.8

77.4

31.4

Minor 5ss

31.5

-2.1

3.6

45.4

49.7

Minor BPS

49.9

0.07

2.1

73.52

43.4

Associated Gene:

Gene:

PPP1R12A

Ensembl Gene ID:

ENSAPLG00000015197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032737

41118436 - 41236452

118017

ENSAPLT00000015944

41118948 - 41236452

117505

ENSAPLT00000039875

41112823 - 41236452

123630

ENSAPLT00000035807

41112823 - 41236452

123630

ENSAPLT00000033917

41125784 - 41236452

110669