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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41145699_41149074_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41145699 - 41149074

Intron Length:

3376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTCTA

5'SS Class:

major

3'SS Sequence:

ATCTTATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTGTGCTAAATT

Flanking Amino Acid:

STSDIDEKENRDSSASSIRG

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

74.1

38.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.1

0.74

0.8

76.8

35.8

Minor 5ss

37.9

-1.4

49.8

46.4

Minor BPS

52.1

0.15

2.1

72.1

45.3

Associated Gene:

Gene:

PPP1R12A

Ensembl Gene ID:

ENSAPLG00000015197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032737

41118436 - 41236452

118017

ENSAPLT00000015944

41118948 - 41236452

117505

ENSAPLT00000039875

41112823 - 41236452

123630

ENSAPLT00000035807

41112823 - 41236452

123630

ENSAPLT00000033917

41125784 - 41236452

110669