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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41150645_41153593_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41150645 - 41153593

Intron Length:

2949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TAATTGGCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTTGTCTTAATT

Flanking Amino Acid:

QGTPTSPIKKYDFIPPIMPV

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

66.4

0.37

43.6

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

72.6

0.79

1.4

82.74

39.5

Associated Gene:

Gene:

PPP1R12A

Ensembl Gene ID:

ENSAPLG00000015197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032737

41118436 - 41236452

118017

ENSAPLT00000015944

41118948 - 41236452

117505