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Intron Name: Anas_platyrhynchos_platyrhynchos_1_412549_413866_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

412549 - 413866

Intron Length:

1318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TAGCACTGAAGT

Flanking Amino Acid:

ELIHSSQDEDRQSNASQTLC

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.9

34.9

Major BPS

0.3

34.1

Major PPT

86.6

0.82

0.8

84.6

Minor 5ss

36.3

-1.5

2.9

41.7

Minor BPS

47.3

-0.1

1.9

64.99

44.6

Associated Gene:

Gene:

PPP6R2

Ensembl Gene ID:

ENSAPLG00000003046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048408

381682 - 447727

66046

ENSAPLT00000003179

381682 - 447727

66046