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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41276599_41279449_F

Intron Information:

Intron Rank:

132130

Intron Class:

major

Intron Phase:

Intron Coordinates:

41276599 - 41279449

Intron Length:

2851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTAG

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTCTTACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

76.8

34.6

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

83.1

0.74

0.8

81.3

35.4

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

67.5

0.54

1.7

80.08

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036306

41276518 - 41279789

3272