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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41276599_41283034_F

Intron Information:

Intron Rank:

132126

Intron Class:

major

Intron Phase:

Intron Coordinates:

41276599 - 41283034

Intron Length:

6436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTCCTCATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

76.8

34.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.6

0.51

0.9

70.7

35.1

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

61.3

0.43

1.8

80.1

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035064

41274531 - 41283423

8893