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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41321780_41322458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41321780 - 41322458

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTGTTGTAAACT

Flanking Amino Acid:

FQAQGSRCQIVPNTGKDRDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.9

0.65

0.9

70.1

41.4

Minor 5ss

-1.4

47.2

42.5

Minor BPS

52.9

0.17

2.3

78.77

43.9

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689