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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41322614_41325803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41322614 - 41325803

Intron Length:

3190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTATTCTAACT

Flanking Amino Acid:

GTPEPQYTVWVHNSPDCYGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

81.8

38.5

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

70.8

0.47

74.9

33.7

Minor 5ss

38.9

-1.2

2.8

43.3

43.8

Minor BPS

64.5

0.53

1.7

84.97

35.2

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689