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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41333609_41334369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41333609 - 41334369

Intron Length:

761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGACTC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TGCAATGTAATA

Flanking Amino Acid:

RDWRDDFPACTETCEDSFVH

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

65.4

38.9

Major BPS

0.75

78.6

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

38.4

-1.3

3.3

53.5

38.4

Minor BPS

43.7

-0.4

2.1

53.24

39.5

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689