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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41335311_41335564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41335311 - 41335564

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTTCTATATTT

Flanking Amino Acid:

GSKIEQECSNCICTGGIWNC

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

77.7

31.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.97

0.5

16.2

Minor 5ss

41.3

-1

2.5

47.2

43.7

Minor BPS

0.3

1.8

79.08

37.4

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689