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Intron Name: Anas_platyrhynchos_platyrhynchos_1_4133672_4149166_F

Intron Information:

Intron Rank:

142542

Intron Class:

major

Intron Phase:

Intron Coordinates:

4133672 - 4149166

Intron Length:

15495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

ATTTTCCTATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

88.6

0.87

0.6

85.2

22.3

Minor 5ss

36.8

-1.5

3.2

49.6

46.6

Minor BPS

57.1

0.22

1.9

74.2

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033084

4122822 - 4149366

26545