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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41337176_41340137_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41337176 - 41340137

Intron Length:

2962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGATGGTGAAAT

Flanking Amino Acid:

ITLQKASCGQNFDHACIESI

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.65

0.7

30.8

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

42.6

-0.4

2.5

64.06

45.4

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689