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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41340262_41341870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41340262 - 41341870

Intron Length:

1609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

ATTTCAGTGACC

Flanking Amino Acid:

TGPNQAFNLNGAIEIRNISS

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

82.8

0.74

0.9

77.4

35.8

Minor 5ss

35.3

-1.7

3.1

46.4

Minor BPS

52.3

0.05

2.3

73.4

37.4

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689