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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41349542_41351943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41349542 - 41351943

Intron Length:

2402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCATCTTAATA

Flanking Amino Acid:

PCASGCICPPGMAEHRGKCY

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.2

39.3

Major BPS

100

1.24

0.5

100

Major PPT

76.7

0.6

78.4

33.6

Minor 5ss

-0.2

2.8

59.7

45.1

Minor BPS

0.69

1.2

75.33

36.5

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689