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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41353407_41365923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41353407 - 41365923

Intron Length:

12517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GTATCTATAAGT

Flanking Amino Acid:

VSDCQAYLLKSTDNSNISII

Intron Amino Acid Position:

875

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.7

0.65

0.9

72.5

37.3

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

54.9

0.23

1.9

74.58

41.9

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016651

41321719 - 41412407

90689