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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41366059_41366585_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41366059 - 41366585

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GAATGTCTTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

AATGTCTTAAAG

Flanking Amino Acid:

IYFSEPSEKQGQENKSNYQL

Intron Amino Acid Position:

920

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

1.1

85.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

58.6

0.2

1.2

56.3

43.3

Minor 5ss

38.2

-1.3

2.8

46.3

Minor BPS

57.8

0.11

1.6

59.92

41.6

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016651

41321719 - 41412407

90689